hal-01328509
https://sde.hal.science/hal-01328509
doi:10.1111/fwb.12513
[UNIV-ST-ETIENNE] Université Jean Monnet - Saint-Etienne
[ENS-LYON] École Normale Supérieure de Lyon
[SDE] Sciences De l'Environnement
[UNIV-LYON3] Université Jean Moulin - Lyon III
[INSTITUT-TELECOM] Institut Mines Télécom
[CNRS] CNRS - Centre national de la recherche scientifique
[UNIV-LYON1] Université Claude Bernard - Lyon I
[UNIV-LYON2] Université Lumière Lyon 2
[INSA-LYON] Institut National des Sciences Appliquées de Lyon
[ENTPE] Ecole Nationale des Travaux Publics de l'Etat
[IRSTEA] IRSTEA - Institut national de recherche en sciences et technologies pour l'environnement et l'agriculture (<b>anciennement Cemagref</b>)
[EVS_UMR5600] Environnement, Ville et Société
[GIP-BE] GIP Bretagne Environnement
[BIOENVIS] Fédération de Recherche BioEnviS, BioEnvironnement et Santé (Université de Lyon)
[AGREENIUM] Archive ouverte en agrobiosciences
[LABEX-DRIIHM] Laboratoire d'Excellence Dispositif de Recherche Interdisciplinaire sur les Interactions Hommes-Milieux
[OHM-VALLEE_DU_RHONE] Observatoire Hommes-Milieux Vallée du Rhône
[INSA-GROUPE] Groupe INSA
[UDL] UDL
[UNIV-LYON] Université de Lyon
[INSTITUTS-TELECOM] composantes instituts telecom
[INRAE] Institut National de Recherche en Agriculture, Alimentation et Environnement
[LEHNA] Laboratoire d'Ecologie des Hydrosystèmes Naturels et Anthropisés
[RHONECO] RhônEco
[ZABR] ZABR - Zone Atelier Bassin du Rhône
[BIOEENVIS] Fédération de Recherche Biodiversité, Eau, Environnement, Ville, Santé (FR BioEEnViS)
[TEST3-HALCNRS] TEST3-HALCNRS
How sampling influences the statistical power to detect changes in abundance: an application to river restoration
Vaudor, Lise
Lamouroux, Nicolas
Olivier, Jean Michel
Forcellini, Maxence
[SDE.BE] Environmental Sciences/Biodiversity and Ecology
ART
negative binomial
mixed models
statistical power
temporal variability
type I error
1. Assessing how populations respond to ecological restoration is particularly difficult because their abundance results from many sources of variation. In addition, abundance estimates depend on sam- pling efforts that are limited by financial or practical constraints. 2. We used local abundance counts from the Rho^ne river restoration monitoring programme to quan- tify how sampling strategies and population characteristics influenced statistical power for detecting restoration effects.3. We first fitted observed changes in abundance of 13 fish taxa and 35 invertebrate taxa collected in microhabitats of four restored reaches of the Rho^ne river over 15 years, using a generalised linear mixed model. The model accounted for a restoration effect, random temporal variation between field surveys and spatial variation within surveys (i.e. microhabitat variation in abundance was assumed to follow a negative binomial distribution). We then used numerical simulations to calculate the sta- tistical power (i.e. the probability of detecting a true change) and the type I error (the probability of detecting a non-existent change) associated with various hypotheses of restoration effect size, mean abundance and temporal and spatial variation.4. Model fits revealed that accounting for temporal variation is needed to reduce type I error associ- ated with the effect of restoration. Significant abundance changes were observed for 27 of 104 (26%) of the taxa-reach combinations. 5. When assuming temporal variation and population characteristics typical of our data sets, power simulations showed that the probability of detecting a moderate change (50–200%) in abundance was <38% in all tests. The average probability of detecting large changes (500–1000%) was 61%. In these conditions, power was increased by low spatial variation and high sampling effort. Large numbers of surveys (e.g. 16 instead of 4) increased the power by 20 points if surveys were balanced before and after restoration.6. Because our simulations covered a wide variety of population characteristics and sampling strate- gies, they can be used a priori to determine which sampling strategy is best adapted for detecting res- toration effects from repeated abundance counts.
2015
en
Freshwater Biology
Wiley