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authIdHal_s : christophe-douady

Geomorphic influence on intraspecific genetic differentiation and diversity along hyporheic corridors

Florian Malard , Cécile Capderrey , Benjamin Churcheward , David Eme , Bernard Kaufmann , et al.
Freshwater Biology, 2017, 62 (12), pp.1955 - 1970. ⟨10.1111/fwb.13040⟩
Journal articles hal-01723507v1

Characterization and PCR multiplexing of 14 new polymorphic microsatellite loci for the invasive subantarctic carabid Merizodus soledadinus (Coleoptera: Carabidae).

Lisa Lalouette , B. Kaufmann , L. Konecny , David Renault , Christophe Jean Douady
Conservation Genetics Resources, 2009, 1, pp.455-458. ⟨10.1007/s12686-009-9105-9⟩
Journal articles hal-00462140v1
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PFR²: a curated database of planktonic Foraminifera18S ribosomal DNA as a resource for studies of plankton ecology, biogeography, and evolution

Raphaël Morard , Kate F Darling , Frédéric Mahé , Stéphane Audic , Yurika Ujiié , et al.
Molecular Ecology Resources, 2015, 15 (6), pp.1472-1485. ⟨10.1111/1755-0998.12410⟩
Journal articles hal-01149023v2

Fragmentation promotes the role of dispersal in determining 10 intermittent headwater stream metacommunities

Maïlys Gauthier , Bertrand Launay , Guillaume Le Goff , Herve Pella , Christophe Jean Douady , et al.
Freshwater Biology, 2020, 65 (12), pp.2169-2185. ⟨10.1111/fwb.13611⟩
Journal articles hal-03138187v1
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Methodology for Single-Cell Genetic Analysis of Planktonic Foraminifera for Studies of Protist Diversity and Evolution

Agnès K.M. Weiner , Raphael Morard , Manuel Weinkauf , Kate F. Darling , Aurore Andre , et al.
Frontiers in Marine Science, 2016, 3 (255), pp.1-15. ⟨10.3389/fmars.2016.00255⟩
Journal articles hal-01420794v1
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Worldwide Genotyping in the Planktonic Foraminifer Globoconella inflata: Implications for Life History and Paleoceanography

Raphaël Morard , Frederic Quillevere , Christophe Jean Douady , Colomban de Vargas , Thibault de Garidel-Thoron , et al.
PLoS ONE, 2011, 6 (10), pp.e26665. ⟨10.1371/journal.pone.0026665⟩
Journal articles hal-00657029v1

Expansion géographique des espèces introduites : L’exemple du carabique Merizodus soledadinus dans les iles subantarctiques françaises

D Renault , Lisa Lalouette , Mathieu Laparie , Tiphaine Ouisse , Bernard Kaufmann , et al.
2èmes Rencontres Rennaises ‘Invasions Biologiques’, UMR CNRS 6553 ECOBIO, Nov 2013, Rennes, France
Conference papers hal-01111136v1

Anthropization level of Lascaux Cave microbiome shown by regional‐scale comparisons of pristine and anthropized caves

Lise Alonso , Thomas Pommier , Bernard Kaufmann , Audrey Dubost , David Chapulliot , et al.
Molecular Ecology, 2019, 28 (14), pp.3383-3394. ⟨10.1111/mec.15144⟩
Journal articles hal-02310389v1

Multiplicité des symbioses : du parasitisme au mutualisme

Wafa Achouak , Philippe Bertin , Pierre Capy , Didier Debroas , Franck Dedeine , et al.
L’empreinte du Vivant, Le Cherche Midi, pp.191, 2015, 978-2-7491-4383-5
Book sections hal-02389481v1

Unravelling phylogenetic relationships among regionally co-existing species: Hydropsyche species (Trichoptera: Hydropsychidae) in the Loire River

Bernhard Statzner , Christophe Jean Douady , Lara Konecny , Sylvain Dolédec
Zootaxa, 2010, 2556, pp.51-68
Journal articles halsde-00521281v1

Phylogeny, age structure, growth dynamics and colour pattern of the Salamandra algira algira population in the Edough Massif, northeastern Algeria

Selma Bouzid , Lara Konecny , Odile Grolet , Christophe Jean Douady , Pierre Joly , et al.
Amphibia-Reptilia, 2017, 38 (4), pp.461 - 471. ⟨10.1163/15685381-00003127⟩
Journal articles hal-01655714v1
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Unique and shared effects of local and catchment predictors over distribution of hyporheic organisms: does the valley rule the stream?

Samuel Mouron , David Eme , Arnaud Bellec , Mélanie Bertrand , Stefano Mammola , et al.
Ecography, 2022, 2022 (5), pp.e06099. ⟨10.1111/ecog.06099⟩
Journal articles hal-03616026v1

Mitochondrial genomes reveal the extinct Hippidion as an outgroup to all living equids

Clio Der Sarkissian , Julia Vilstrup , Mikkel Schubert , Andaine Seguin-Orlando , David Eme , et al.
Biology Letters, 2015, 11 (20141058), pp.1-5. ⟨10.1098/rsbl.2014.1058⟩
Journal articles hal-01323150v1

Preventing the pollution of mitochondrial datasets with nuclear mitochondrial paralogs (numts)

Sébastien Calvignac , Lara Konecny , Florian Malard , Christophe Jean Douady
Mitochondrion, 2011, 11 (2), pp.246-254. ⟨10.1016/j.mito.2010.10.004⟩
Journal articles istex halsde-00815371v1

Molecular evidence for multiple lineages in the gorgonian family Plexauridae (Anthozoa : Octocorallia).

H.H. Wirshing , C.G. Messing , Christophe Jean Douady , J. Reed , M.J. Stanhope , et al.
Marine Biology, 2005, 147, pp.497-508
Journal articles halsde-00340217v1

Timetree of aselloidea reveals species diversification dynamics in groundwater

Claire Morvan , Florian Malard , Emmanuel Paradis , Tristan Lefébure , Lara Konecny-Dupré , et al.
Systematic Biology, 2013, 62 (4), pp.512-22. ⟨10.1093/sysbio/syt015⟩
Journal articles halsde-00837844v1

Trophic ecology of groundwater species reveals specialization in a low-productivity environment

Clémentine François , Florian Mermillod-Blondin , Florian Malard , François Fourel , Christophe Lecuyer , et al.
Functional Ecology, 2016, 30, pp.262-273. ⟨10.1111/1365-2435.12484⟩
Journal articles hal-01286189v1

Life History Traits Impact the Nuclear Rate of Substitution but Not the Mitochondrial Rate in Isopods

Nathanaëlle Saclier , Clémentine François , Lara Konecny-Dupré , Nicolas Lartillot , Laurent Guéguen , et al.
Molecular Biology and Evolution, 2018, 35 (12), pp.2900-2912. ⟨10.1093/molbev/msy184⟩
Journal articles hal-01951580v1

Disconnection between genetic and morphological diversity in the planktonic foraminifer Neogloboquadrina pachyderma from the Indian sector of the Southern Ocean

Aurore André , Frédéric Quillévéré , Ralf Schiebel , Raphaël Morard , Hélène Howa , et al.
Marine Micropaleontology, 2018, 144, pp.14-24. ⟨10.1016/j.marmicro.2018.10.001⟩
Journal articles hal-02152105v1

Microsatellite Development and First Population Size Estimates for the Groundwater Isopod Proasellus walteri

Cécile Capderrey , Bernard Kaufmann , Pauline Jean , Florian Malard , Lara Konecny-Dupré , et al.
PLoS ONE, 2013, 8 - e76213 (9), pp.1-10. ⟨10.1371/journal.pone.0076213⟩
Journal articles halsde-00876955v1
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Subterranean species inventory in the molecular era

Florian Malard , Héloïse Verdier , Lara Konecny-Dupré , David Eme , Christophe J Douady , et al.
Karstologia, 2022
Journal articles hal-03810304v1
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Dispersal limitation by structures is more important than intermittent drying effects for metacommunity dynamics in a highly fragmented river network

Maïlys Gauthier , Guillaume Le Goff , Bertrand Launay , Christophe J Douady , T. Datry
Freshwater Science, 2021, 40 (2), pp.302 - 315. ⟨10.1086/714376⟩
Journal articles hal-03369180v1
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Less effective selection leads to larger genomes

Tristan Lefébure , Claire Morvan , Florian Malard , Clémentine François , Lara Konecny-Dupré , et al.
Genome Research, 2017, 27, pp.1016-1028. ⟨10.1101/gr.212589.116⟩
Journal articles hal-01544879v2

The cryptic and the apparent reversed: lack of genetic differentiation within the morphologically diverse plexus of the planktonic foraminifer Globigerinoides sacculifer

Aurore Andre , Agnes Weiner , Frederic Quillevere , Ralf Aurahs , Raphaël Morard , et al.
Paleobiology, 2013, 39 (1), pp.21-39. ⟨10.1666/0094-8373-39.1.21⟩
Journal articles hal-00797451v1

No Evidence That Nitrogen Limitation Influences the Elemental Composition of Isopod Transcriptomes and Proteomes

Clémentine François , L. Duret , Laurent Simon , Florian Mermillod-Blondin , Florian Malard , et al.
Molecular Biology and Evolution, 2016, 33 (10), pp.2605-2620. ⟨10.1093/molbev/msw131⟩
Journal articles hal-01370129v1

Nomenclature for the Nameless: A Proposal for an Integrative Molecular Taxonomy of Cryptic Diversity Exemplified by Planktonic Foraminifera

Raphael Morard , Gilles Escarguel , Agnès K.M. Weiner , Aurore Andre , Christophe Jean Douady , et al.
Systematic Biology, 2016, 65 (5), pp.925-940. ⟨10.1093/sysbio/syw031⟩
Journal articles hal-01368819v1
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Bedrock radioactivity influences the rate and spectrum of mutation

Nathanaëlle Saclier , Patrick Chardon , Florian Malard , Lara Konecny-Dupré , David Eme , et al.
eLife, 2020, 9, pp.e56830. ⟨10.7554/eLife.56830⟩
Journal articles hal-03051267v1

Bayesian phylogeographic inferences reveal contrasting colonization dynamics among European groundwater isopods

David Eme , Florian Malard , Lara Konecny-Dupré , Tristan Lefébure , Christophe Jean Douady
Molecular Ecology, 2013, 22, pp.5685-5699. ⟨10.1111/mec.12520⟩
Journal articles istex halsde-00921300v1

Testing dispersal and cryptic diversity in a widely distributed groundwater amphipod (Niphargus rhenorhodanensis).

T. Lefébure , Christophe Jean Douady , Florian Malard , Janine Gibert
Molecular Phylogenetics and Evolution, 2007, 42 (3), pp.676-686. ⟨10.1016/j.ympev.2006.08.020⟩
Journal articles istex halsde-00157625v1

GOTIT: A laboratory application software for optimizing multi‐criteria species‐based research

Florian Malard , Philippe Grison , Louis Duchemin , Lara Konecny-Dupré , Tristan Lefébure , et al.
Methods in Ecology and Evolution, 2020, 11, pp.159-167. ⟨10.1111/2041-210X.13307⟩
Journal articles hal-02329439v1